rs50665357 SNP Detail

Summary

• ID
  rs50665357
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:17902573 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTAATACCT CTACTTATAG ACACTGGACA TTCACACTTG
  TGATTTTAGT TAACTTGCCT GCTCACAGAG CCACCTAGTG GCAAAATCAG GAAAGTGCAG
  R
  TACTGTGTAG GCTGTATTTC TGGGTAAAAT TAAGTCTCTG ATAAGGACCT CTTTCTCAAA
  TAAAGCTAGC CATGATCTGC CTCCACATAT AGCTGCTTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134654121	ENSMUSSNP6237729	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50665357					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:17902573 () rs orientation: forward

Symbol	Name	Function Class
Gm42187	predicted gene, 42187	within coordinates
Gm65968	predicted gene, 65968	within coordinates
Rr573861	regulatory region 573861	within coordinates
Rr573862	regulatory region 573862	15 bp distal