rs50648970 SNP Detail

Summary

• ID
  rs50648970
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147518083 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATATACTTA CAAATCAATC TACGTAAAAG GCAGGCTGAG
  CCTCACAAAG CAAGTCCAGA AAGTGATTTA AGTATACTTG GGCTAATTAG GTTCATGGTT
  G
  CCAACTGGTC ATAACTAAGG TCATAGGAAA TTAAGGTTGA ATCAGAGTGG TAATTAGTTG
  GTTTCATGTG GTACACTCCT AAGAGACACT CATGTTCTC                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss147960331	ENSMUSSNP700428	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321414642	CHEV_4_146807735	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs50648970					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147518083 () rs orientation: forward

Symbol	Name	Function Class
Rr398818	regulatory region 398818	275 bp upstream
Rr398819	regulatory region 398819	674 bp upstream
Rr604487	regulatory region 604487	1071 bp distal