rs50647150 SNP Detail

Summary

• ID
  rs50647150
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:98083610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCGGAAGC ACGTGCCGCA
  GGTATCCTGG GCCAGGCAGA AGTTGCCACG AGTTTCCTGT GAAACTGTGA TTAGATTGAG
  ACGTGCCAAG GTGAGGTAAA AGTTTATTTT CTTTTCAGTT TTTATTTCGT GCTTATAATG
  TGGGGAGTTG CAGGTGAACT TGTATATGAG GATGCACGCA TGTGTAAGGG TGCTGGTGGA
  Y
  GTGAGGGGGT TGGAAGGCAA CTGACGGTTA GCCAGGAGCT GTTCCCTTTA TTTGAGACGG
  CATCTCTCAT TGGTCTGGAG CGCAGCAGTA ATGATCTAGT CTGATGGGTT AGCTACTTCT
  AGTCTGCTTC TGCTTCTTCC ATACGGGAAT TCTGCATGCA CATAACCATG CCTACGATTT
  TCCACACGGA GTCTGGGTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss133423443	ENSMUSSNP6554513	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50647150					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:98083610 () rs orientation: forward

Symbol	Name	Function Class
Rr635262	regulatory region 635262	669 bp distal
Rr635263	regulatory region 635263	1216 bp distal
Rr635264	regulatory region 635264	611 bp proximal