rs50616712 SNP Detail

Summary

• ID
  rs50616712
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:100062176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATGCCTTC AAGACACAGT
  GTACTGTTTA AGATTCTTGA TTCTGAAGTC TAGTTTTGCC ACTTTCAAGA GTAAGCCAGC
  AGCCAAGTGT AACTTGGTAC CATTTCTTTC CTTATTCCTA TTGCTATATC TATTGTCTTC
  ATGATATGGA GTTGGACTTT GGTTTGTATC AGGCTCTCTT ATAGCTTTGG CTGGCCCCTA
  M
  CTTGCTATGC AACTGAGAAT GGCAGCCTTG AACATCCTGC CTCTGTCTCC AAAGTGCTCT
  AGGAGTCTGA GTATGTGCCA TCATGGCCAC AGACTAGACT ATGTTAGATG GAAACTGTAA
  CAGGGTGATG GCACAGGTTC ATTCAATCCT GTCCCTTTTT CCTCCTGAGG ATTCAACAAC
  ACCGTATTTC CCAGTGTCCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss133427053	ENSMUSSNP1668415	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs50616712					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:100062176 () rs orientation: forward

Symbol	Name	Function Class
Rr635572	regulatory region 635572	645 bp proximal
Rr635573	regulatory region 635573	1630 bp proximal