rs50614915 SNP Detail

Summary

• ID
  rs50614915
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:118405457 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCTGGCCCA AGGATGTGAG CGTAGGAGAG CAGACCCTGA
  CACTTATCTT CCTTGTGGTG ACATGGATAA GGGACTGATC CCCTCCCCTC TTTGCTCTCA
  S
  CACCTGAGGA GAGCTGTCCC TGCCCCTCAC CTGCTGCAGC TCTCAGGAGA GCAAGCCCCC
  ACACCTCACC TGGACAGCAC AGTGGAGCTG ACCCTGATG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss149162317	ENSMUSSNP1854314	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss321662375	CHEV_5_118717401	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50614915					SNP	C	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:118405457 () rs orientation: forward

Symbol	Name	Function Class
Gm25076	predicted gene, 25076	812 bp downstream
Gm73266	predicted gene, 73266	1851 bp upstream
Rr618847	regulatory region 618847	879 bp distal
Rr618848	regulatory region 618848	1433 bp proximal
Rr618849	regulatory region 618849	1802 bp proximal
Rr618850	regulatory region 618850	1873 bp proximal