rs50614689 SNP Detail

Summary

• ID
  rs50614689
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135795482 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGACC TAGGCTCGGT TCCCATCACT
  Y
  ACATGGTGGT TCACAACAAT CTCTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147557311	ENSMUSSNP360667	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
ss321353921	CHEV_4_135624086	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50614689					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135795482 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15093	CpG island 15093	1819 bp proximal
Rr602257	regulatory region 602257	1657 bp proximal
Rr602258	regulatory region 602258	1941 bp proximal