rs50607633 SNP Detail

Summary

• ID
  rs50607633
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:139663223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTGCCTCTC TTCAGCAATG TATCCTTCCC AGACCTGCTG
  AAAAGCTACT TACATTGTTT TTGGACCACC TTGCCAGACA CCTAGGGAGA TAGCACTCCC
  Y
  TCCCTCCCAA CTTGTGCAGA AAAAGGTCAG CCAAAACCAC ATCTTCCCTG TACAAAGGAT
  TTGTTTCTCT GCCCTTTCCA AAATAACATG TTCCCACTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss147665529	ENSMUSSNP167568	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs50607633					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:139663223 () rs orientation: forward

Symbol	Name	Function Class
Rr566053	regulatory region 566053	104 bp proximal