rs50605864 SNP Detail

Summary

• ID
  rs50605864
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:74795741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGGG GGGGGGAAAC GGTGTAGCCC
  A
  CCCATCAAAT CACACACCAG GATTC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss146764229	ENSMUSSNP1775599	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320348862	CHEV_2_74803454	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs50605864					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:74795741 () rs orientation: forward

Symbol	Name	Function Class
Gm75057	predicted gene, 75057	59 bp upstream
Igs15	intergenic site 15	within coordinates
Rr559413	regulatory region 559413	586 bp distal
Rr559414	regulatory region 559414	842 bp distal
Rr559415	regulatory region 559415	within coordinates
Rr559416	regulatory region 559416	78 bp proximal