rs50605358 SNP Detail

Summary

• ID
  rs50605358
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60958929 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACGTAGTG GCTGTTCCTG
  GTTGTCAACT TGACTATATC TGGAATGAAC TACAATCCAG AATTGGAAGG CTCACCTGTG
  ATCCAGATCT TGAGGCTGGG AGAAATAAGT TTCTGACATG GATTTTGGCC TGGAGATTTT
  GAGGCATAGT GGCTATGAGT CCCAGGAATC CAAGGCAAGG AGAGCTGAGT TTAAGGTCAT
  M
  TGGGAAAAAG CAAGTCAGAT CCAGGCATGG CAGCACACAC CTTTAATCTG ATCCACACCT
  TCTGCTGGAG AACTACAGAA GGACATTGGA AGAAGGAAGA CTCTCTCTTC TTTACCTGCT
  TGCTTTGTGG GACTGAGCAA GTGCTAGATC CTTGGACTTC ATTCACAGCT GCTGCTGATC
  ATTGTTAGGG AGTTGGACTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss135222425	ENSMUSSNP76472	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs50605358					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60958929 () rs orientation: forward

Symbol	Name	Function Class
Rr577470	regulatory region 577470	878 bp distal