rs50589914 SNP Detail

Summary

• ID
  rs50589914
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108070697 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGACAAAGA ACATCACACA GGCTGGCATT GTTGCCAGAA
  AAGCACATCT GCCAAATTTG TTCTCGTCAA ACCCAAGTCC TGGCCACTAG AACAGCATTT
  W
  AAAAGGAGAC AAATAGGAGA GGAGACAAAA AGAAAAACAT GATCAAACAG GGACTTGGGC
  AAGCATGTCT CCCCACAGGA AATAGCGGGA CCTGGGATG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133494805	ENSMUSSNP353977	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50589914					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108070697 () rs orientation: forward

Symbol	Name	Function Class
Rr636032	regulatory region 636032	within coordinates
Rr636033	regulatory region 636033	1752 bp proximal