rs50586469 SNP Detail

Summary

• ID
  rs50586469
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136867941 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGATACAGG GAGGACCTGG GAGAGTCACT GGTCCTCCCT
  GCTGCTCCCT GAACACAGTG AAAGATGTGC CCACGGGAAT AGAAGGTCCT GATGGTGTCC
  R
  ACAGGTGGGG ATGCCTTAAC CTAAGCCACA GAGAGGCTTC TCCATCCTCC CTCCCTGGGG
  GCTCACAGAA GAGGAAGTCA TCAGGGAACC AAGTTCCTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147595855	ENSMUSSNP2457150	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss321361594	CHEV_4_136696545	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50586469					SNP	G	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136867941 () rs orientation: forward

Symbol	Name	Function Class
Gm31762	predicted gene, 31762	within coordinates
Rr602553	regulatory region 602553	1578 bp proximal
Rr602554	regulatory region 602554	1837 bp proximal