rs50583279 SNP Detail

Summary

• ID
  rs50583279
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125101031 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTACATG AGCACTGTGG
  TACTTATGCC ATAACAAACA CAAATATGCA CAGAGACAGA GACACACACA TACATACTAC
  ACACATGCAT ATATACACAC ACACAAATAT AGACATCTAC AAATACTACA CACACACACA
  CACACACACA CACACACACA ATTTTCTTTT TCAAAGACCT CAATTCATTC ACAACTAATA
  Y
  GTAATAATAT GTTGATATTT TAGGGAAATA GCAGCATTCC ATTTAACTTC AATTAAAAAC
  ATGCAGTGTA TTAAGGACAT ACCATCTTAC TACTTCTTGA AGACACGTTA AAGGCTATTT
  TTGTTTTCAA GTAAAGCTGC AGGGGACGTT TTCATAGTTG ATATCACAAT GCACATGGGG
  TAATGTGGAA ACAATTTTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135806137	ENSMUSSNP2780667	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50583279					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125101031 () rs orientation: forward

Symbol	Name	Function Class
Rr584607	regulatory region 584607	324 bp distal