rs50550405 SNP Detail

Summary

• ID
  rs50550405
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:8496095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCTTTAT TCAGTAATGA
  CTTCAAGGGC CTTGTGTATT CTTGTGGTAT TAATGAGTCT TCTGTGAATA CTTGCTTGAG
  TAATGGTGCA GTGGCAAAAC TAAAGTTTAT TTAGGACACT GCTCCACCCA AGGTGAGTAA
  TTAGAGATGG TATGTGTGTA AACTCAGTCA CCCTGACTCC CCCACTCAAC CCTGGCTCTA
  S
  GGAAGCAGTA CCAGAAAGCA AAATGGGGGG TGGAGCACAC GGGACAGCTG AGGCTAGGAA
  GACATGGGAA AGGCCAGTGC TGAGGATGCT GGGAGGACAT CTGTATGTGG AAATGCATTC
  TGACCACTGA GTCCAGCACA GTTAATAGAC ATTGGAATGG CATGAGATTT ATTAAGAAAA
  GAATTATTTC CCCCTCCATA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132970272	ENSMUSSNP5501737	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50550405					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8496095 () rs orientation: forward

Symbol	Name	Function Class
Gm45062	predicted gene 45062	Intron
Rr626407	regulatory region 626407	245 bp distal