rs50532530 SNP Detail

Summary

• ID
  rs50532530
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:94447429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTGTAATA GGGATCCGAT
  GCCCTCTTCT GGTGTGCCTG AAGACAGCAA TAGTGTACTG ACAGACATGA AATAAATAAA
  TAAATAAATC TTAAAAAAAA AAAAAAAAAG AACTGAATGT ACCGTGTTGC TAGAAACTTG
  ATCTTAAGTA GTTGTCCTAC AAAGCTGCAG TTATGAGTCC TGAAGTAAAT TTTACATAGC
  M
  AGGGTCTCCT AAGTGAGGGT TTCTGTCATG TAATACAAAA AATTCCTGAA TCATGTCCAG
  CTGCTGAGCA TCCATAATTC TAGTAGGTTT ATGTGTGGTT CTAAGACATC AAGAGAGACA
  ATAATATTTA TGAAAGACAG CAAGCATACA AATTAGTAAA TGCTGAGATC TGTATCTGAA
  AGGAGACTCA GTTCCTAGGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147049682	ENSMUSSNP5566189	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50532530					SNP	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:94447429 () rs orientation: forward

Symbol	Name	Function Class
Rr595335	regulatory region 595335	1906 bp distal
Rr595336	regulatory region 595336	639 bp distal
Rr595337	regulatory region 595337	278 bp proximal