rs50526045 SNP Detail

Summary

• ID
  rs50526045
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:63946719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TCCCTGAAAG GGAGGCAAGA AATTCTCAGA AACATCTGTT
  GGGGATTGGC AGGTGTTGGC CCAATGTCTG CCTTTTTTTT TTTTTTTTTT TTTTTTTTTT
  G
  GCAGCGTAGA CAAAGAAAAT TACGCCGTGT AGGCTGAGAA GAATGGCCAG TAGACATCAC
  TGGGGCACCG TTAAGGGAAG GCGTAGTGGG ACACTGTCGT G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss135244554	ENSMUSSNP6158417	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs50526045					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:63946719 () rs orientation: forward

Symbol	Name	Function Class
Rr577614	regulatory region 577614	325 bp proximal
Rr577615	regulatory region 577615	601 bp proximal
Tssr29383	transcription start site region 29383	1 bp upstream