rs50518710 SNP Detail

Summary

• ID
  rs50518710
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:55678995 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTTGGCTG TAATTATGGT
  TCTAGGTAGC CTTATCCAAC AAGGGCTCAC TCTGACCAAG TGCCACCTGT AATACAGGAA
  TGGCTAGTGT CAGTCTTCAT CGCAGAAGAA TATTTGGTCT ATGGGGGAGT TGTAAGAAAC
  ATGTAAACAA CAACAACAAC AAAGACCCTA CTATTTAATG CTCAATCAAG AGATACAGAT
  M
  TTTCCTCTGA GGGGCTTCAA AGGCAGTGCT AAACTTTTAT GCTTGTCCCT ATGTGTTTCC
  AGTCTTCACA GTTGCTCCCA ATCCCGTTTA TCAGCTTCGA TTCTTTTCGA ATGACTAAAG
  GGTAAGTCAT GGTTATTTGT CTAGGTCTTA CTTTTAGCCC GTGGATGTAG ATTAGTATTT
  GATTTTTATA AAATCACAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133214594	ENSMUSSNP5165123	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50518710					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:55678995 () rs orientation: forward

Symbol	Name	Function Class
Rr406317	regulatory region 406317	1689 bp proximal
Rr631015	regulatory region 631015	706 bp distal
Rr631016	regulatory region 631016	1831 bp proximal