rs50516303 SNP Detail

Summary

• ID
  rs50516303
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:75183935 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGACAGCTC CCCGTTTCTT GCTCTTCCTA TGCATCATTT
  GCTCTGGTTT TAAACGAAAT TGCTGAAGAG CTTTCCAAAC ATTACTGTAG CTATTGTCGT
  C
  TGCCCCCCCC CCTCGGCCCC CCCCCATCCT CTCCTTTGCA CGGTTGATCA TTCCATCCTG
  AGAGTTCAAC CCCCAGCTCT TCCCTTCATT AGCTTGGTG                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss146766294	ENSMUSSNP7051902	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs50516303					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75183935 () rs orientation: forward

Symbol	Name	Function Class
Gm39857	predicted gene, 39857	within coordinates
Igs15	intergenic site 15	within coordinates
Rr559469	regulatory region 559469	1675 bp distal
Rr559470	regulatory region 559470	606 bp distal
Rr559471	regulatory region 559471	937 bp proximal