rs50503894 SNP Detail

Summary

• ID
  rs50503894
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148600009 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTTATTAG AGGGTGAAAA
  ACCCTTGGGT GTCAGTCATA AAAACTCAAC AACAACCAAC CACCACCAAC ACAATGTAGT
  CTGCACCTCC TTCAGTCACT TCCATGGTTT TGCTTAAAAC TTTGACCTCT GACCCCTGCC
  ATGTAACTAT AACTCCGAGT TTGCAGTAAG CAAACAGAAT GAGTCACGGA ATGCATTCCC
  R
  GAAAAAAGGC CTACCCTTTT TGTCCCTAAA CTACAGACAA AATCATCAAC GTGCCGGGGC
  TATCATCTCT TCATGGGACT TTTCCCGTTA TGTGAGAGGG CATTTTCATC CAGGAGTGGC
  TCTTCTAGAA TGTGCCTGCT TGAAAACTGA AGGTGACCAT GGCAAACTAG TCTCCGGGTA
  AGGTCGGTCT TAGAGGGCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136065026	ENSMUSSNP3654203	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50503894					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148600009 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr587222	regulatory region 587222	1130 bp proximal
Rr587223	regulatory region 587223	1950 bp proximal