rs50494743 SNP Detail

Summary

• ID
  rs50494743
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138111888 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGCGACAGA CCGGGAGTTG TGAACACCTA TGGGAGTCAC
  TACTGGTTGT CACCTTGGCA GGCTCTAGAC TCACTGAGTG TGTCTCACAC CTCTGAGCAT
  K
  TCCCTGAGGG AGTTTCTAGA CTGGGTCGGT CATGGGGGGA GAGACTGTGG TCGATACAAT
  GCCATGGGCT GGGACTGGAT AAAGCAGAGG TGGCTAGCT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147644327	ENSMUSSNP4042757	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
ss321372991	CHEV_4_137940492	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50494743					SNP	G	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138111888 () rs orientation: forward

Symbol	Name	Function Class
Rr602903	regulatory region 602903	1906 bp distal
Rr602904	regulatory region 602904	396 bp distal