rs50468388 SNP Detail

Summary

• ID
  rs50468388
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:72579189 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTGAGTAAC ATACAGAACT CTGGATTTCC AAAATGCTCA
  CAGGTAAGAT GATGTTAAAG AGTTTTATTC CCACTTTAGT TAACCATATT TAAAAGCCTT
  W
  ATTTTAAAAC ATTAATTTAC CTTTGGTTAG CAAATCTCCA AGAAAAGCTG AAACCTCACC
  TGCCTTCAGA GTGCTTTCAC AAATGCCATG TGTGAATTA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146544657	ENSMUSSNP4504673	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50468388					SNP	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:72579189 () rs orientation: forward

Symbol	Name	Function Class
Rr593974	regulatory region 593974	1551 bp proximal