rs50446141 SNP Detail

Summary

• ID
  rs50446141
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:9024049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACATT AGCGAGCCCA GTCTTGTGTG
  W
  ATCACATTTG GTCATCACAA CTACT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss145985289	ENSMUSSNP743308	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss321038628	CHEV_4_8951196	CHEVERUD	SCREENING_POP	f	SNP			T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs50446141					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:9024049 () rs orientation: forward

Symbol	Name	Function Class
Rr588642	regulatory region 588642	561 bp proximal
Rr588643	regulatory region 588643	1654 bp proximal