rs50435655 SNP Detail

Summary

• ID
  rs50435655
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:68954686 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AATAATCAGC CATTGTTAAA CAAAATTGTT ATTATATCTC
  TGTGACAAAT TTCTCTAACA TTTCAGGCCC AGGGAAAATG TTTCTTTTGC TAGTTTTGCT
  K
  TTTTTTTTGG TGAGCCATGA AGGTCATACA ATGATAACTT TGTTGCCAGC TGCTAAGGAA
  TTGGCTACAA GTCTTAGCAA GCTCTTCCTT CCCAGGATAC A                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss135264721	ENSMUSSNP4842060	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs50435655					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:68954686 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13256	CpG island 13256	1829 bp distal
Gm65005	predicted gene, 65005	986 bp downstream
Rr578121	regulatory region 578121	1100 bp distal
Rr578122	regulatory region 578122	1989 bp distal
Rr578123	regulatory region 578123	305 bp distal