rs50424370 SNP Detail

Summary

• ID
  rs50424370
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:45608985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGTACAAC ACGTACAGTC
  CCAGGGCCAG ATGAATGGTT TTCCATTAGA GGTACACGGT GCCATCTGGG GCACCCAGGA
  AGATAATGCC ACAAAGACAC CCCCATCTCT CACACACTCG AAGGGAAGAT TTGTACCGCT
  CTGCCTGGCT CTCCTCTCCT CTTCCACTGC AGTGCAACGT GCCTGGGTTC TGAAATCTGC
  R
  TCCTTCTCTG CAGTATCTCA GGGCACTCTG TGGCTTGGGG GGTGGGTGAG CTTGAAATGG
  GATTCTGTAC GCACCAAAAG GTACAACACA ACTGCAATGC AAACTGTCAA CGCAGATACA
  AGGATTTCCT TCAGTTAAAG TAACCAGGTG CAATTCCTGC TTCTGAAAGG GCTTATAGAA
  CAAGGGGACT GTTTAAAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss52410577	NES15387142	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs50424370					SNP	G	G	G	G	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52410577	NES15387142	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:45608985 () rs orientation: forward

Symbol	Name	Function Class
Rr465677	regulatory region 465677	within coordinates