TCAAT ATAAAGAAGG ATACTAAGGG R CCATCTTGGA ATAGACTCCC TATTA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
---|---|---|---|---|---|---|---|---|
ss133574983 | ENSMUSSNP1519056 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | G | A |
SNP Consensus Information | ||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
||||
rs50421783 | SNP | A | G | A |
Location: Chr6:116111722 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr637158 | regulatory region 637158 | 1236 bp proximal | ||||||
Rr637159 | regulatory region 637159 | 1363 bp proximal | ||||||
Rr637160 | regulatory region 637160 | 1653 bp proximal | ||||||
Tmcc1 | transmembrane and coiled coil domains 1 | Intron | ||||||
Tssr62558 | transcription start site region 62558 | 868 bp upstream | ||||||
Tssr62559 | transcription start site region 62559 | 853 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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