rs50411084 SNP Detail

Summary

• ID
  rs50411084
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:7559142 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTGACTTT GGGATGGCAA
  TCCCATACTT GAGGCCCCAC TTTCCTCCCC TGCCTCTCAG GCTGCTTATT TCCATCCATT
  CTTCCGTTTC TATTTTATGG GCTAATTTGA GGAGGATTGA TATTCACTCT TCTTTAAAAG
  TTTAGTAGAA TTCTACACTA AAATGATCTG GCTTTAGGCT TTATTTCTAT TTTGGGGTGG
  T
  GGTAGAGAGG ACAGGCTTCT ATTCCACTAG GGGCTATATG TATGTTTATA TACCTTATCT
  GATTTTGATT TAACTTTTGT AAGTGGTACG TATTGAAAAA TTACCCACTT CTTTTTGTTT
  TCCTCATTTG TTGGAATACA GGTTTTTATA AGTATGCCCT TATGATTCTT TTGATTTCTT
  TGGTGTCTAT TGTTACACTT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss134557387	ENSMUSSNP3585656	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50411084					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:7559142 () rs orientation: forward

Symbol	Name	Function Class
Gm66025	predicted gene, 66025	within coordinates
Rr573246	regulatory region 573246	1409 bp distal