rs50406284 SNP Detail

Summary

• ID
  rs50406284
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:125373673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCTTGGAA TCTCATTTGT
  CTGTAAAATG GATAGTTTCC TTCAGACCTT CTGTTCTCTA AAATCCATCA AGTTCCTCAT
  CTTTACTTCT TGTGAGATTT CCACAGTGCC TGGGCATGCT GTGAAAGCCA AGGAGGAGGG
  GCGCCTGGAA TACTTTGCAG CTATGTATGG GGCATTCTTT CTGAGCATTT CAGTCCAGGG
  Y
  ACACAGGAGG AAACTTCCAA AGGTGAAGTC TCAACATTTC TGCTGGTCCC CACTGAGTTT
  GTGTCAAGAA ACACACACAT ACAGAAAGAG AGATGGGGGG TATTTTTACT TCATTTCTGT
  CTGTTTATGG GGGATTTTCC TGCTGTTAGA GGGTGGAAAA ATAAATGATT ACTCACAAAC
  ATCTACTTCA GCCCAAGACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147480356	ENSMUSSNP4279784	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50406284					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125373673 () rs orientation: forward

Symbol	Name	Function Class
Gm75244	predicted gene, 75244	within coordinates
Rr564232	regulatory region 564232	765 bp distal