rs50372585 SNP Detail

Summary

• ID
  rs50372585
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:81041609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCAAGGTC AACCTTCAAG
  AAAATGCTTC AGTTTTGAAG TAGCAAAGGA AACCTTTGTG CTAGTGCTTC ACTGCCTGTA
  AAACCTCTTT TCTGCAGAAA GTATTGAAGT ATTTGAATCC TGTCTTCAGC TGTCCACAAG
  GGCCCTGAGC TCATTTGTTA ATAAAGAAGA CTTCCATTTG AAAATCATGT TTGATAAATG
  M
  AGGACAGATC ATTTTAAAGC ATCAAATGTG TTCTTTTAAA GAATGTTTGA AATGTTCTCA
  ATGACAAATA CATTGGGGTG GAAGGAATAT TCATTATGTG GAAGTAGGCT ACTCCAAATG
  TCAGGGTCTC TACTGAGTCC CTGGGGTTCA GACTCGACAT AGATCACAAT TATATCATAA
  TGCAGATTTC ACAAAATTGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146846119	ENSMUSSNP1800986	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50372585					SNP	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:81041609 () rs orientation: forward

Symbol	Name	Function Class
Rr594197	regulatory region 594197	765 bp proximal