rs50345751 SNP Detail

Summary

• ID
  rs50345751
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:163553204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAGCGTGC CTGGCCTCTA
  AGAGATCTAT CAAGACTTCT GCTTCTTCCC AGTGGCCCCT TAGAACCACG GATGGTAGCC
  CCTACCCACA GAAGTCACAG TATGCTGGGT AGAGCATAGT CGCTAAGAGG GTGGGGCTTT
  AAAATTGATA TCCCAAATTG TTGGTTTTTT TCCTATTGCT GTGGATTAGG AATTTTGAGG
  Y
  AGGTGGGGTA AGGAGGGGCT GATATTTGGG ATGTAAAGTG AATTGAATAA ATTAAAAATT
  TTTGAGGCAA ATTCATAGAC TCAACCAAAC ATCAGCGAAA AGACTGAAGA ATTTGATCTC
  CAGCACAAAA TCCAATGAAG AGGATTAGCA CGAGGGAGGC TGAGGCAGGA GAATCAGAGG
  TTTGAGGCCA GCCTGGGATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss148209698	ENSMUSSNP6975227	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50345751					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163553204 () rs orientation: forward

Symbol	Name	Function Class
Pkig	protein kinase inhibitor, gamma	Intron
Rr569473	regulatory region 569473	201 bp distal
Rr569474	regulatory region 569474	1093 bp proximal