rs50337770 SNP Detail

Summary

• ID
  rs50337770
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150304860 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTT CTCAACCACT GAGACACCCC
  G
  AAAGAAAAGG TATTTCAGAC CCATC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss148050402	ENSMUSSNP5952839	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321428673	CHEV_4_149594512	CHEVERUD	SCREENING_POP	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs50337770					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150304860 () rs orientation: forward

Symbol	Name	Function Class
Rr605229	regulatory region 605229	599 bp distal
Rr605230	regulatory region 605230	678 bp distal
Rr605231	regulatory region 605231	307 bp distal
Rr605232	regulatory region 605232	62 bp distal
Rr605233	regulatory region 605233	within coordinates
Tssr44739	transcription start site region 44739	298 bp downstream