rs50336814 SNP Detail

Summary

• ID
  rs50336814
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89262503 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTGACTAA TCCAGACCAG
  GCTAGAACAT ACCAGCACAA GCCAGACCAG ACTAACTTAA CCAATCCAGA CCAAACCAAC
  TACACCAGAA TAGTTTAGAC TAGATTAGAT CAGGGTAGAT CACACTACTG TAGGCCAGAC
  TAGACTAGCT TAGACAATAC AAGAATAGAC CAAACTGGGC CAGGTTAGAC CAAACCAGAC
  K
  ATACTAGAGT AGACTAGCCC AGTAAAACTT AGACCAGCCC AGAAGTTAGA CCAGAATAGA
  CAAGCCCAGG CCAGCTTAAA TGAATATAGG CTAGACCTAG ACCAAATTAG ACCAGCCCAA
  ACCAAATAAA ACTATATCAA GCCAGACCAG ATCCCAGCAG TCCAGTCCAG ATTAGCTTTG
  ACCAGAACAT TCTACTCAGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss133371434	ENSMUSSNP2889468	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50336814					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89262503 () rs orientation: forward

Symbol	Name	Function Class
4930512J16Rik	RIKEN cDNA 4930512J16 gene	within coordinates
Rr379731	regulatory region 379731	within coordinates
Rr379732	regulatory region 379732	1968 bp upstream
Rr634092	regulatory region 634092	within coordinates
Rr634093	regulatory region 634093	590 bp proximal
Rr634094	regulatory region 634094	816 bp proximal
Rr634095	regulatory region 634095	1302 bp proximal