rs50319848 SNP Detail

Summary

• ID
  rs50319848
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143914040 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCAGTTAT CTAAAATGAG
  ACATACAACT CCGGTACTTT TTTTTTTTTT TAAAGAAACA CAACCCGTTT CAGGGGCTTT
  ATTCAACATA GGAGCCGAAT GGATCCCAGA TAAAGCCTTT GCTTTCCCTA CTTGCCCTGA
  AATTATTTTT CTGTACTTCA TCTTCTCAAC TAAGGTCTTA CTCCTGGACT TTATAGGCAG
  G
  AGTTGAAGAT AAGCATCTAG CTCTTTGATG AGGAAAAGGA GAAGAGATTG TGCCCTTAGA
  AGGCCAGTGC AAAGCTGGTT TCTGATTGGA GGCTGTTTAG AAAGGACATT TTACAAGGAT
  GATTGTCCAT TACTCTGCCA TCAGAGAGAT CCTTAGAACT CCAAAGGTCC AGTAGAGTTG
  CCATAGTGAG GGAACTAAAC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss136029298	ENSMUSSNP1957166	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50319848					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143914040 () rs orientation: forward

Symbol	Name	Function Class
Rr586603	regulatory region 586603	349 bp distal