rs50315419 SNP Detail

Summary

• ID
  rs50315419
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:55374512 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTAGT TGGATGGGGA GCAAAGATGC
  T
  GTGTGGGGCC CGGGGAAAGC TCAGT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss133209418	ENSMUSSNP6906291	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss321806015	CHEV_6_55347521	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50315419					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:55374512 () rs orientation: forward

Symbol	Name	Function Class
6430584L05Rik	RIKEN cDNA 6430584L05 gene	within coordinates
Rr630967	regulatory region 630967	1975 bp distal
Rr630968	regulatory region 630968	688 bp distal
Rr630969	regulatory region 630969	221 bp distal
Rr630970	regulatory region 630970	1205 bp proximal