rs50309945 SNP Detail

Summary

• ID
  rs50309945
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148257045 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCTACCCCA CTCCCCCTCA CACTGTACCC TGTAGAGCCA
  CAGGGGTCCA GGGCCCCCCA AGGTACATAT CCTTCCCTCA GGGCTGTGGT ACATTTTTTT
  T
  AAAGATTTAT TTATTTATTT ATTATATGTA AGTACACTGT AGCTGTCTTC AGACACTCCA
  GAAGAGGGAG TCAGATCTCG TTACGGATGG TTGTGAGTC                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147994886	ENSMUSSNP5716868	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50309945					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148257045 () rs orientation: forward

Symbol	Name	Function Class
Gm68601	predicted gene, 68601	1344 bp upstream
Rr604615	regulatory region 604615	968 bp distal
Rr604616	regulatory region 604616	1606 bp distal
Rr604617	regulatory region 604617	988 bp proximal
Rr604618	regulatory region 604618	1384 bp proximal