rs50308412 SNP Detail

Summary

• ID
  rs50308412
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130590165 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGTTCATTT TAGTATTTTT TTTTATTTTT ACAAAAACAA
  TCAAAACTCT AAAGTGTCTC CTGTCTGGAT GGATATTACC ATCCCCACCA TCCAGGTGAC
  R
  GGGGTTTGAC ACACTAAGAA CCTCTCCTTG GTGGCTGCCT CTGACACATA GCCAATTGGC
  AGACATTGCT CCCGGGTCCC CCTCAGCGGT TTGCTCTTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135899922	ENSMUSSNP4940250	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50308412					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130590165 () rs orientation: forward

Symbol	Name	Function Class
Gm36443	predicted gene, 36443	within coordinates
Gm66061	predicted gene, 66061	1731 bp upstream
Rr585211	regulatory region 585211	within coordinates