rs50304288 SNP Detail

Summary

• ID
  rs50304288
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119542344 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCCTATAA TGCTCTTCTG
  GCTACCCTCA CCCTGTCCCA AATAGTATAG TCACTGTAGG ACTATGTCTT CGTTTCAGTT
  TCCATCCAAG CAGGGAACTC ACCTTCACCC ATGCACCTTG TGCAATGCTG AGCACAGCTC
  CCACACCCGT GGAAGAGGCG CCTTGTCTTT TGAGGTGAAT AGAGACAGAA TGGGAGCCTA
  Y
  AGAGGTGACG TGTCCCGCTC TGGCAGGCCT GCTGACTGTC TTTCCTGCTC TTTAGGCAAT
  TGTTCCATGG GTGATTTGGG CCTGTTCTGT GTCTCCCTTA CCTTGCTGTA AGTCCTTTAG
  GCCCAACAGA AACTCTATCA GTCAAGGGAA CTGTAGGAGG GGAACTAGGA AGAGGCACTG
  AGGCCCTCGG GCTCCAGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133591037	ENSMUSSNP6285465	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50304288					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119542344 () rs orientation: forward

Symbol	Name	Function Class
Gm44317	predicted gene, 44317	841 bp upstream
Rr637714	regulatory region 637714	1705 bp distal
Rr637715	regulatory region 637715	137 bp proximal