rs50302203 SNP Detail

Summary

• ID
  rs50302203
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134907089 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACCA AGGGAAGAGA AGTCTGGATG
  R
  GCCGATGCTG TGGGACACGA GGACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147540895	ENSMUSSNP1624681	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss321351097	CHEV_4_134735693	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs50302203					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134907089 () rs orientation: forward

Symbol	Name	Function Class
Rr601942	regulatory region 601942	115 bp distal
Rr601943	regulatory region 601943	621 bp distal
Runx3	runt related transcription factor 3	1788 bp downstream