rs50274214 SNP Detail

Summary

• ID
  rs50274214
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:130907917 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAAGGCGT GCACCTCCAC
  ACCCAATTTG TTCTGTTTTG TAAGAAATGA GGTTTTATTG TGTTGCTCAG GCTGATCTCA
  GTCTCCTGGC CTCAAGGTAT CCTCCCATGT CGATACACAG CACAAGGCGT AGGAAAAGTG
  GCAGATTTTT TTAAATTAAG TTTTCTTTCC AAAATATAGA TTCAGAAATG TGAGATTTTC
  R
  CAAAGTGAAC CTGCTCACTT CCCTGGCTCT CGAATCTCCA TTGTGGCTCC CGCCCATCCC
  TTTTGCCCAC CAGTGGCTGT TGTATTGACT TCTATCCCAT TCCTTAACTA TACCTGTCCT
  TGGTCTTCGC TGTGAACTTG CTTGGGCTGA GAATCACCTT GTTCCGGGCA CATCAGGTCA
  GTGAGGGTGT TTCCAGAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147598248	ENSMUSSNP4432087	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50274214					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:130907917 () rs orientation: forward

Symbol	Name	Function Class
Rr565176	regulatory region 565176	1623 bp proximal
Tssr26336	transcription start site region 26336	1289 bp downstream