rs50250445 SNP Detail

Summary

• ID
  rs50250445
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:147893906 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TCCTAGGAGG CCAGCACAGC AATTGCAGCT TAAAGAAGTT
  TTCAGGTTCC GCAAACACTG AATTGTGAGA GGGGCGGCAG AAAATGCACC CCTGCTCCAC
  R
  CCCCTGCCCA GCTCCTGCCC GTTCCCCAGT CCAACAGCTC CTCTGACTTG GAAGGTGACA
  GGACCAGCTG CTCAATGTCC TAGGAGGGGC AACTGCAGCT T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147982752	ENSMUSSNP4666883	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50250445					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147893906 () rs orientation: forward

Symbol	Name	Function Class
Gm20707	predicted gene 20707	within coordinates
Rr377386	regulatory region 377386	within coordinates
Rr604501	regulatory region 604501	637 bp distal
Rr604502	regulatory region 604502	within coordinates
Rr604503	regulatory region 604503	329 bp proximal
Tssr44548	transcription start site region 44548	353 bp downstream
Zfp984	zinc finger protein 984	Intron