rs50248898 SNP Detail

Summary

• ID
  rs50248898
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:36215982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATCA CAGCTTTACT GTGCTGCCCA
  R
  ATGAGGCTTA GGACCTGCTC TTCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss133117470	ENSMUSSNP5791041	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss321784591	CHEV_6_36189047	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs50248898					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:36215982 () rs orientation: forward

Symbol	Name	Function Class
Gm57759	predicted gene, 57759	332 bp downstream
Gm67063	predicted gene, 67063	within coordinates
Rr628531	regulatory region 628531	190 bp distal