rs50248564 SNP Detail

Summary

• ID
  rs50248564
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:140475466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCC GCGAGCTTGA AGAGCTGCGG
  R
  ATGTCGATGA TGTCACCCTC TGCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147711149	ENSMUSSNP4445107	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50248564					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140475466 () rs orientation: forward

Symbol	Name	Function Class
Gm69576	predicted gene, 69576	within coordinates
Padi4	peptidyl arginine deiminase, type IV	Coding-Synonymous
Rr603538	regulatory region 603538	20 bp distal
Rr603539	regulatory region 603539	241 bp distal
Rr603540	regulatory region 603540	21 bp distal