rs50228498 SNP Detail

Summary

• ID
  rs50228498
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:17254977 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      C AGGTCTGCTG ATAGAGGCTA ACAGAATCAC AAGAGGAACA
  ATCTCTAAAC AGAGACAACT ATAGCAACTA ACTCCAGAGA TTACCAGATG GTGAAAGGTA
  M
  ACTTAAGAAT CTTACTAACA GAAACCAAGA CCACTCACCA TGATCAGAAC CCAGCACTCC
  CACTTTGCCC AGTCCAGGGC ACCCCAATCT CACCCGAAAA G                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146035299	ENSMUSSNP7092942	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50228498					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:17254977 () rs orientation: reverse

Symbol	Name	Function Class
Rr573816	regulatory region 573816	1034 bp proximal