rs50213723 SNP Detail

Summary

• ID
  rs50213723
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141789569 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCCACTGG CTGGCAGAGG
  TAGTGAACAT CCCTGCACTT AACTCCGAGC CCAAATCACG CGCGCACGAA CTGCTAGCCT
  GCTCCTGACC CCTTAGCTGT TCAGCTCTGC ACACAGTCCC TCCTCAGAGT TGCGGGGCAG
  GGTGGTGCCC CCCGTGGTGG AGCTAAACAC CCCAACAAGC CTGGCCACAG TGGCTGTGGT
  R
  CAGTGACCGA ATGGGGGCAG CCATCTTTGG AGTTTGTGTT GTTAAAACTG ATGCCACATG
  TGGTTGACAC ATGCCAGCAT TTCGGAGGTG AAAGCAGTAG TTCAAGGGCA GCTTTGACTG
  CTATTTTAAT TTAAAGACAA ACTGGGCTGC ATCACACACA CACACATACA CACACACACA
  CACACACACA CACTTCACCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147747833	ENSMUSSNP6355137	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50213723					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141789569 () rs orientation: forward

Symbol	Name	Function Class
D4Mit311	DNA Segment, Chr 4, Massachusetts Institute of Technology 311	133 bp proximal
Rr603976	regulatory region 603976	818 bp distal
Rr603977	regulatory region 603977	515 bp proximal
Tmem51	transmembrane protein 51	Intron