rs50211322 SNP Detail

Summary

• ID
  rs50211322
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172122580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TAATAACCCT TTCATGCATA ATACTACAAC CCACCTATTT
  CCTAGGCCAT TGTGTATTCC TGTGTATGGG TGTGACTCGG CTATTGTTCT AAGTAATTAC
  Y
  ATGTAGACTA GCCCTGAGCT TTCTAGCTCT ATTCAATTAA ATAGTAATGC TGGATTATTT
  TCACTGTCTC TACTAGAGGT AAATTTGAAT GTTACTAGAT A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148312866	ENSMUSSNP3103350	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50211322					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172122580 () rs orientation: forward

Symbol	Name	Function Class
Gm74903	predicted gene, 74903	within coordinates
Rr571639	regulatory region 571639	1418 bp proximal
Rr571640	regulatory region 571640	1927 bp proximal