rs50156994 SNP Detail

Summary

• ID
  rs50156994
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:120870748 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCAG ATAAACAGTG ATGCACAAAT
  K
  TAGTAGAACA AAGGTAAACA GAAGG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss147376954	ENSMUSSNP4680245	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320481386	CHEV_2_120866003	CHEVERUD	SCREENING_POP	f	SNP			T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs50156994					SNP	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:120870748 () rs orientation: forward

Symbol	Name	Function Class
Rr563766	regulatory region 563766	662 bp distal
Rr563767	regulatory region 563767	925 bp proximal
Rr563768	regulatory region 563768	1005 bp proximal