rs50136985 SNP Detail

Summary

• ID
  rs50136985
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:174333984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAGGCAGA AGTAGGTGGA
  ATTCTGGGCA GCCTAGTCTA CAGAGTGAGT TCCATGACAG CCAAAGGTAC ACACAGAGGA
  ACATTTTTTT TTTTCCAAAA ATGAACAAAC AAAAGAGAAT TAATTTTGCC TTGTTTTATT
  TTTAAATTGA CAGCAGCCAC TAAGGACTAC TAAAGTTTTT TGGAAAAGAA AAATTACGAG
  K
  AAGAAGTAGA CCATTGTGAC CGAAGAGACA GATGCTGAGA AGCGGCGTGC CACTCAGGGG
  GAGCCATTAG ATGCAAATTA AGAGAGATTA CCAGGTTGGG GCTTCTGAAC TTACCGAATC
  AAAGCACACC CTGTTCAGAG CTGGTGCCTG TGTGTTGAAA TGGAGACTTC TGTATACTTT
  TACTCAAAGT ACGGATGGAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss148344127	ENSMUSSNP2055651	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs50136985					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:174333984 () rs orientation: forward

Symbol	Name	Function Class
Rr572141	regulatory region 572141	765 bp proximal
Rr572142	regulatory region 572142	868 bp proximal