rs50136633 SNP Detail

Summary

• ID
  rs50136633
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153419785 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGGG TATGTTCTGT CACCAGCCCC
  Y
  ACCCCATCTC TGACTCTGCA CCTCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147997133	ENSMUSSNP4580636	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320564191	CHEV_2_153403601	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs50136633					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153419785 () rs orientation: forward

Symbol	Name	Function Class
Rr567686	regulatory region 567686	1372 bp distal
Rr567687	regulatory region 567687	301 bp distal
Rr567688	regulatory region 567688	139 bp distal