rs50132110 SNP Detail

Summary

• ID
  rs50132110
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4408057 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CCCCCAGCAT CCTTTACTAC TACTGGATGG AGCCCTTTCA
  GATGCTGAGA ACCAGTAAGC AAGAGAACTG CTTGAGACAA GAACACTCTG TAAACAGAGT
  Y
  CATTTCCTTT GCCTTAGTGA TCTTATGTGG AAACAAAATA GTCATTTGAT TCACCATTGG
  CATCATCTTT CAGTGGAATT CCACCACAAA GGGCTTTGCT G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss132931524	ENSMUSSNP1647092	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs50132110					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4408057 () rs orientation: forward

Symbol	Name	Function Class
Rr626010	regulatory region 626010	within coordinates
Rr626011	regulatory region 626011	122 bp distal