rs50130737 SNP Detail

Summary

• ID
  rs50130737
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:97965151 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTTGCAGC CAGCTTCCAC
  TCTTCTCCTT TATACCAGGA TTTGTCTCCA TGTTCCCTTG TTTTTTCTTT CTTTCTTTTT
  TGTCAAGGAT ACTTTGGTAT GGATCATGTA GAAAACAAGG TTATCTATAG CAGACCTAGA
  GCTCTGGGCT CATGGTTTCT CTTGTAACAT CAGGAATGTG CCTAGAAAAG ATGTTCAGAT
  Y
  CCGGGATGCC TCTCTCTCAG GCTTTCCCCA GGTCACTTGA GAAAGCTAAC TTTCACCTTT
  ACAATTGCAC ATTGTCCACC CCTGGAAACT TCCGTGTAAA AAGCAGTGTG CACAGAATGA
  TCTTAGAGTG TGTAATGAAG AATTCTCTCC CAAAACACAA GTTAACAAAA CCTTAATGTT
  TGTTGTTGCC TTTTTGAACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133422713	ENSMUSSNP6476598	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50130737					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:97965151 () rs orientation: forward

Symbol	Name	Function Class
Mitf	melanogenesis associated transcription factor	Intron
Rr635251	regulatory region 635251	1570 bp distal