rs50121556 SNP Detail

Summary

• ID
  rs50121556
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:81047098 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTTCTGGC AAAGAATCAC
  ATTTTAAAAA GTCTACATCT GAGGGAGCTT GCTGGAATAT AGACATGCTC TTGGTACACA
  TACTTGATCC CCCTAGCTGT AATACAGACA CAACTTTAAT TCCTCTGGAT GGAATAAAAA
  CACACCTTTA TTACACACCT AAGTTAAGTT AGTTGATGGA AGTAACCATG TTTGAAGGTG
  M
  CAACTAATTA AGAGGCAGAC AAAGTGACGA ATCAGAGAAA GATTTGTCAG AGTGAGTCTG
  AAATAGGATA TACCCAACTC TCATGAGAAC AGACAGGGAA GAAAGGCTAA TTGAGAACAG
  TACAGAGTAA GTCAGTCGAA TGCAGTTGAA TTCAGTTCAG TCAGTGTCAG AGTCAGTGTT
  TGCTGGGTTC CTTAAGCAGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146846475	ENSMUSSNP5186978	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50121556					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:81047098 () rs orientation: forward

Symbol	Name	Function Class
Rr594198	regulatory region 594198	938 bp proximal