rs50100245 SNP Detail

Summary

• ID
  rs50100245
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:129886215 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGCTCCT GGACCCTGGA
  GAACCCAGAC CCCACCAAGT ACTCCCTCTA CCTGCGCTTC AACCGGCAGG AGCAGGTTTG
  CACACACTTT GCCCCGCGCC TGCTGCCCCT GGACCACTAC CTGGTCAACT TTACCTGCCT
  GCGGCCTGGT CCAGAGGAAG CCACAGCCCG GGCTGAGTCG GAGGTGGGAC GGCCAGAGGA
  G
  GAGGAGGAGG AGGCGGCGGC AGCAGCATCA GGGTTGGAGT TGTGTGGTGG CTCAGGCCCC
  TTTACCTTTC TGCACTTCGA CAAGAACTTT GTGCAGCTGT GCCTGTCGGC TGAGCCCTCT
  GAGGCCCCTC GTCTGCTAGC GCCTGCTGCC CTGGCCTTCC GTTTTGTGGA GGTCTTGCTG
  ATCAACAACA ACAACTCCAG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147456634	ENSMUSSNP2158618	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50100245					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129886215 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adgrb2	adhesion G protein-coupled receptor B2			Coding-Synonymous
				Noncoding-Transcript-Variant
Rr600410	regulatory region 600410			834 bp proximal
Rr600411	regulatory region 600411			1719 bp proximal